Skip Navigation

This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (96)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Matsushika, A.
Right arrow Articles by Mizuno, T.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Matsushika, A.
Right arrow Articles by Mizuno, T.
Agricola
Right arrow Articles by Matsushika, A.
Right arrow Articles by Mizuno, T.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Plant and Cell Physiology, 2000, Vol. 41, No. 9 1002-1012
© 2000 Oxford University Press


Paper

Circadian Waves of Expression of the APRR1/TOC1 Family of Pseudo-Response Regulators in Arabidopsis thaliana: Insight into the Plant Circadian Clock

Akinori Matsushika1, Seiya Makino1, Masaya Kojima and Takeshi Mizuno2

Laboratory of Molecular Microbiology, School of Agriculture, Nagoya University, Chikusa-ku, Nagoya, 464-8601 Japan

Abstract

The Arabidopsis pseudo-response regulator, APRR1, has a unique structural design containing a pseudo-receiver domain and a C-terminal CONSTANS motif. This protein was originally characterized as a presumed component of the His-to-Asp phosphorelay systems in Arabidopsis thaliana. Recently, it was reported that APRR1 is identical to the TOC1 gene product, a mutational lesion of which affects the periods of many circadian rhythms in Arabidopsis plants. TOC1 is believed to be a component of the presumed circadian clock (or central oscillator). Based on these facts, in this study four more genes, each encoding a member of the APRR1/TOC1 family of pseudo-response regulators were identified and characterized with special reference to circadian rhythms. It was found that all these members of the APRR1/TOC1 family (APRR1, APRR3, APRR5, APRR7, and APRR9) are subjected to a circadian rhythm at the level of transcription. Furthermore, in a given 24 h period, the APRR-mRNAs started accumulating sequentially after dawn with 2–3 h intervals in the order of APRR9->APRR7->APRR5->APRR3->APRR1. These sequential events of transcription, termed ‘circadian waves of APRR1/TOC1’, were not significantly affected by the photoperiod conditions, if any (e.g. both long and short days), and the expression of APRR9 was first boosted always after dawn. Among these APRRs, in fact, only the expression of APRR9 was rapidly and transiently induced also by white light, whereas such light responses of others were very dull, if any. These results collectively support the view that these members of the APRR1/TOC1 family are together all involved in an as yet unknown mechanism underlying the Arabidopsis circadian clock. Here we propose that the circadian waves of the APRR1/TOC1 family members are most likely a molecular basis of such a biological clock in higher plants.

Footnotes

1 These two authors equally contributed to this work.

2 Corresponding author: E-mail, tmizuno@agr.nagoya-u.ac.jp; Fax, +81-52-789-4089.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
Plant Physiol.Home page
H. Knight, A. J.W. Thomson, and H. G. McWatters
SENSITIVE TO FREEZING6 Integrates Cellular and Environmental Inputs to the Plant Circadian Clock
Plant Physiology, September 1, 2008; 148(1): 293 - 303.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
S. Fujiwara, L. Wang, L. Han, S.-S. Suh, P. A. Salome, C. R. McClung, and D. E. Somers
Post-translational Regulation of the Arabidopsis Circadian Clock through Selective Proteolysis and Phosphorylation of Pseudo-response Regulator Proteins
J. Biol. Chem., August 22, 2008; 283(34): 23073 - 23083.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
M. Serikawa, K. Miwa, T. Kondo, and T. Oyama
Functional Conservation of Clock-Related Genes in Flowering Plants: Overexpression and RNA Interference Analyses of the Circadian Rhythm in the Monocotyledon Lemna gibba
Plant Physiology, April 1, 2008; 146(4): 1952 - 1963.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
S. Ito, Y. Niwa, N. Nakamichi, H. Kawamura, T. Yamashino, and T. Mizuno
Insight into Missing Genetic Links Between Two Evening-Expressed Pseudo-Response Regulator Genes TOC1 and PRR5 in the Circadian Clock-Controlled Circuitry in Arabidopsis thaliana
Plant Cell Physiol., February 1, 2008; 49(2): 201 - 213.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
S. Ito, N. Nakamichi, T. Kiba, T. Yamashino, and T. Mizuno
Rhythmic and Light-Inducible Appearance of Clock-Associated Pseudo-Response Regulator Protein PRR9 Through Programmed Degradation in the Dark in Arabidopsis thaliana
Plant Cell Physiol., November 1, 2007; 48(11): 1644 - 1651.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
A. Para, E. M. Farre, T. Imaizumi, J. L. Pruneda-Paz, F. G. Harmon, and S. A. Kay
PRR3 Is a Vascular Regulator of TOC1 Stability in the Arabidopsis Circadian Clock
PLANT CELL, November 1, 2007; 19(11): 3462 - 3473.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
T. Kiba, R. Henriques, H. Sakakibara, and N.-H. Chua
Targeted Degradation of PSEUDO-RESPONSE REGULATOR5 by an SCFZTL Complex Regulates Clock Function and Photomorphogenesis in Arabidopsis thaliana
PLANT CELL, August 1, 2007; 19(8): 2516 - 2530.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
Y. Niwa, S. Ito, N. Nakamichi, T. Mizoguchi, K. Niinuma, T. Yamashino, and T. Mizuno
Genetic Linkages of the Circadian Clock-Associated Genes, TOC1, CCA1 and LHY, in the Photoperiodic Control of Flowering Time in Arabidopsis thaliana
Plant Cell Physiol., July 1, 2007; 48(7): 925 - 937.
[Abstract] [Full Text] [PDF]


Home page
GeneticsHome page
Z. Ding, M. R. Doyle, R. M. Amasino, and S. J. Davis
A Complex Genetic Interaction Between Arabidopsis thaliana TOC1 and CCA1/LHY in Driving the Circadian Clock and in Output Regulation
Genetics, July 1, 2007; 176(3): 1501 - 1510.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
N. Nakamichi, M. Kita, K. Niinuma, S. Ito, T. Yamashino, T. Mizoguchi, and T. Mizuno
Arabidopsis Clock-Associated Pseudo-Response Regulators PRR9, PRR7 and PRR5 Coordinately and Positively Regulate Flowering Time Through the Canonical CONSTANS-Dependent Photoperiodic Pathway
Plant Cell Physiol., June 1, 2007; 48(6): 822 - 832.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
V. Hecht, C. L. Knowles, J. K. Vander Schoor, L. C. Liew, S. E. Jones, M. J.M. Lambert, and J. L. Weller
Pea LATE BLOOMER1 Is a GIGANTEA Ortholog with Roles in Photoperiodic Flowering, Deetiolation, and Transcriptional Regulation of Circadian Clock Gene Homologs
Plant Physiology, June 1, 2007; 144(2): 648 - 661.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
Z. Ding, A. J. Millar, A. M. Davis, and S. J. Davis
TIME FOR COFFEE Encodes a Nuclear Regulator in the Arabidopsis thaliana Circadian Clock
PLANT CELL, May 1, 2007; 19(5): 1522 - 1536.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
M. Murakami, Y. Tago, T. Yamashino, and T. Mizuno
Comparative Overviews of Clock-Associated Genes of Arabidopsis thaliana and Oryza sativa
Plant Cell Physiol., January 1, 2007; 48(1): 110 - 121.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
K. Miwa, M. Serikawa, S. Suzuki, T. Kondo, and T. Oyama
Conserved Expression Profiles of Circadian Clock-related Genes in Two Lemna Species Showing Long-day and Short-day Photoperiodic Flowering Responses
Plant Cell Physiol., May 1, 2006; 47(5): 601 - 612.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
C. Darrah, B. L. Taylor, K. D. Edwards, P. E. Brown, A. Hall, and H. G. McWatters
Analysis of Phase of LUCIFERASE Expression Reveals Novel Circadian Quantitative Trait Loci in Arabidopsis
Plant Physiology, April 1, 2006; 140(4): 1464 - 1474.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
P. A. Salome, J. P.C. To, J. J. Kieber, and C. R. McClung
Arabidopsis Response Regulators ARR3 and ARR4 Play Cytokinin-Independent Roles in the Control of Circadian Period
PLANT CELL, January 1, 2006; 18(1): 55 - 69.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
B.-h. Lee, D. A. Henderson, and J.-K. Zhu
The Arabidopsis Cold-Responsive Transcriptome and Its Regulation by ICE1
PLANT CELL, November 1, 2005; 17(11): 3155 - 3175.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
S. L. Harmer and S. A. Kay
Positive and Negative Factors Confer Phase-Specific Circadian Regulation of Transcription in Arabidopsis
PLANT CELL, July 1, 2005; 17(7): 1926 - 1940.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
A. Ramos, E. Perez-Solis, C. Ibanez, R. Casado, C. Collada, L. Gomez, C. Aragoncillo, and I. Allona
From the Cover: Winter disruption of the circadian clock in chestnut
PNAS, May 10, 2005; 102(19): 7037 - 7042.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
T. Mizuno and N. Nakamichi
Pseudo-Response Regulators (PRRs) or True Oscillator Components (TOCs)
Plant Cell Physiol., May 1, 2005; 46(5): 677 - 685.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
N. Nakamichi, M. Kita, S. Ito, T. Yamashino, and T. Mizuno
PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, Together Play Essential Roles Close to the Circadian Clock of Arabidopsis thaliana
Plant Cell Physiol., May 1, 2005; 46(5): 686 - 698.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
N. Nakamichi, M. Kita, S. Ito, E. Sato, T. Yamashino, and T. Mizuno
The Arabidopsis Pseudo-response Regulators, PRR5 and PRR7, Coordinately Play Essential Roles for Circadian Clock Function
Plant Cell Physiol., April 1, 2005; 46(4): 609 - 619.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
K.-i. Kucho, K. Okamoto, Y. Tsuchiya, S. Nomura, M. Nango, M. Kanehisa, and M. Ishiura
Global Analysis of Circadian Expression in the Cyanobacterium Synechocystis sp. Strain PCC 6803
J. Bacteriol., March 15, 2005; 187(6): 2190 - 2199.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
N. A. Eckardt
Temperature Entrainment of the Arabidopsis Circadian Clock
PLANT CELL, March 1, 2005; 17(3): 645 - 647.
[Full Text] [PDF]


Home page
Plant CellHome page
P. A. Salome and C. R. McClung
PSEUDO-RESPONSE REGULATOR 7 and 9 Are Partially Redundant Genes Essential for the Temperature Responsiveness of the Arabidopsis Circadian Clock
PLANT CELL, March 1, 2005; 17(3): 791 - 803.
[Abstract] [Full Text] [PDF]


Home page
J Biol RhythmsHome page
P. A. Salome and C. R. McClung
The Arabidopsis thaliana Clock
J Biol Rhythms, October 1, 2004; 19(5): 425 - 435.
[Abstract] [PDF]


Home page
Plant Cell PhysiolHome page
T. Fujimori, T. Yamashino, T. Kato, and T. Mizuno
Circadian-Controlled Basic/Helix-Loop-Helix Factor, PIL6, Implicated in Light-Signal Transduction in Arabidopsis thaliana
Plant Cell Physiol., August 15, 2004; 45(8): 1078 - 1086.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
M. G. Mason, J. Li, D. E. Mathews, J. J. Kieber, and G. E. Schaller
Type-B Response Regulators Display Overlapping Expression Patterns in Arabidopsis
Plant Physiology, June 1, 2004; 135(2): 927 - 937.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
P. K. Boss, R. M. Bastow, J. S. Mylne, and C. Dean
Multiple Pathways in the Decision to Flower: Enabling, Promoting, and Resetting
PLANT CELL, June 1, 2004; 16(suppl_1): S18 - S31.
[Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
M. Murakami, T. Yamashino, and T. Mizuno
Characterization of Circadian-Associated APRR3 Pseudo-Response Regulator Belonging to the APRR1/TOC1 Quintet in Arabidopsis thaliana
Plant Cell Physiol., May 1, 2004; 45(5): 645 - 650.
[Abstract] [Full Text] [PDF]


Home page
Genes Dev.Home page
K. Doi, T. Izawa, T. Fuse, U. Yamanouchi, T. Kubo, Z. Shimatani, M. Yano, and A. Yoshimura
Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1
Genes & Dev., April 15, 2004; 18(8): 926 - 936.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
D. E. Somers, W.-Y. Kim, and R. Geng
The F-Box Protein ZEITLUPE Confers Dosage-Dependent Control on the Circadian Clock, Photomorphogenesis, and Flowering Time
PLANT CELL, March 1, 2004; 16(3): 769 - 782.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
N. Nakamichi, S. Ito, T. Oyama, T. Yamashino, T. Kondo, and T. Mizuno
Characterization of Plant Circadian Rhythms by Employing Arabidopsis Cultured Cells with Bioluminescence Reporters
Plant Cell Physiol., January 15, 2004; 45(1): 57 - 67.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
S. Aoki, S. Kato, K. Ichikawa, and M. Shimizu
Circadian Expression of the PpLhcb2 Gene Encoding a Major Light-Harvesting Chlorophyll a/b-Binding Protein in the Moss Physcomitrella patens
Plant Cell Physiol., January 15, 2004; 45(1): 68 - 76.
[Abstract] [Full Text] [PDF]


Home page
J Exp BotHome page
A. J. Millar
Input signals to the plant circadian clock
J. Exp. Bot., January 2, 2004; 55(395): 277 - 283.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
Y. Yamamoto, E. Sato, T. Shimizu, N. Nakamich, S. Sato, T. Kato, S. Tabata, A. Nagatani, T. Yamashino, and T. Mizuno
Comparative Genetic Studies on the APRR5 and APRR7 Genes Belonging to the APRR1/TOC1 Quintet Implicated in Circadian Rhythm, Control of Flowering Time, and Early Photomorphogenesis
Plant Cell Physiol., November 15, 2003; 44(11): 1119 - 1130.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
M. Murakami, M. Ashikari, K. Miura, T. Yamashino, and T. Mizuno
The Evolutionarily Conserved OsPRR Quintet: Rice Pseudo-Response Regulators Implicated in Circadian Rhythm
Plant Cell Physiol., November 15, 2003; 44(11): 1229 - 1236.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
S. Ito, A. Matsushika, H. Yamada, S. Sato, T. Kato, S. Tabata, T. Yamashino, and T. Mizuno
Characterization of the APRR9 Pseudo-Response Regulator Belonging to the APRR1/TOC1 Quintet in Arabidopsis thaliana
Plant Cell Physiol., November 15, 2003; 44(11): 1237 - 1245.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
T. P. Michael, P. A. Salome, H. J. Yu, T. R. Spencer, E. L. Sharp, M. A. McPeek, J. M. Alonso, J. R. Ecker, and C. R. McClung
Enhanced Fitness Conferred by Naturally Occurring Variation in the Circadian Clock
Science, November 7, 2003; 302(5647): 1049 - 1053.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
K. A. Kaczorowski and P. H. Quail
Arabidopsis PSEUDO-RESPONSE REGULATOR7 Is a Signaling Intermediate in Phytochrome-Regulated Seedling Deetiolation and Phasing of the Circadian Clock
PLANT CELL, November 1, 2003; 15(11): 2654 - 2665.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
A. M. Rashotte, S. D.B. Carson, J. P.C. To, and J. J. Kieber
Expression Profiling of Cytokinin Action in Arabidopsis
Plant Physiology, August 1, 2003; 132(4): 1998 - 2011.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
T. Yamashino, A. Matsushika, T. Fujimori, S. Sato, T. Kato, S. Tabata, and T. Mizuno
A Link between Circadian-Controlled bHLH Factors and the APRR1/TOC1 Quintet in Arabidopsis thaliana
Plant Cell Physiol., June 15, 2003; 44(6): 619 - 629.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
T. P. Michael and C. R. McClung
Enhancer Trapping Reveals Widespread Circadian Clock Transcriptional Control in Arabidopsis
Plant Physiology, June 1, 2003; 132(2): 629 - 639.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
M. E. Eriksson and A. J. Millar
The Circadian Clock. A Plant's Best Friend in a Spinning World
Plant Physiology, June 1, 2003; 132(2): 732 - 738.
[Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. Mutsuda, K.-P. Michel, X. Zhang, B. L. Montgomery, and S. S. Golden
Biochemical Properties of CikA, an Unusual Phytochrome-like Histidine Protein Kinase That Resets the Circadian Clock in Synechococcus elongatus PCC 7942
J. Biol. Chem., May 23, 2003; 278(21): 19102 - 19110.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
W.-Y. Kim, R. Geng, and D. E. Somers
Circadian phase-specific degradation of the F-box protein ZTL is mediated by the proteasome
PNAS, April 15, 2003; 100(8): 4933 - 4938.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
N. Nakamichi, A. Matsushika, T. Yamashino, and T. Mizuno
Cell Autonomous Circadian Waves of the APRR1/TOC1 Quintet in an Established Cell Line of Arabidopsis thaliana
Plant Cell Physiol., March 15, 2003; 44(3): 360 - 365.
[Abstract] [Full Text] [PDF]


Home page
Plant CellHome page
P. Mas, D. Alabadi, M. J. Yanovsky, T. Oyama, and S. A. Kay
Dual Role of TOC1 in the Control of Circadian and Photomorphogenic Responses in Arabidopsis
PLANT CELL, January 1, 2003; 15(1): 223 - 236.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
E. Sato, N. Nakamichi, T. Yamashino, and T. Mizuno
Aberrant Expression of the Arabidopsis Circadian-Regulated APRR5 Gene Belonging to the APRR1/TOC1 Quintet Results in Early Flowering and Hypersensitiveness to Light in Early Photomorphogenesis
Plant Cell Physiol., November 15, 2002; 43(11): 1374 - 1385.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
T. P. Michael and C. R. McClung
Phase-Specific Circadian Clock Regulatory Elements in Arabidopsis
Plant Physiology, October 1, 2002; 130(2): 627 - 638.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
A. Matsushika, A. Imamura, T. Yamashino, and T. Mizuno
Aberrant Expression of the Light-Inducible and Circadian-Regulated APRR9 Gene Belonging to the Circadian-Associated APRR1/TOC1 Quintet Results in the Phenotype of Early Flowering in Arabidopsis thaliana
Plant Cell Physiol., August 15, 2002; 43(8): 833 - 843.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
U. Nair, J. L. Ditty, H. Min, and S. S. Golden
Roles for Sigma Factors in Global Circadian Regulation of the Cyanobacterial Genome
J. Bacteriol., July 1, 2002; 184(13): 3530 - 3538.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
M. Murakami-Kojima, N. Nakamichi, T. Yamashino, and T. Mizuno
The APRR3 Component of the Clock-Associated APRR1/TOC1 Quintet is Phosphorylated by a Novel Protein Kinase Belonging to the WNK Family, the Gene for which is also Transcribed Rhythmically in Arabidopsis thaliana
Plant Cell Physiol., June 15, 2002; 43(6): 675 - 683.
[Abstract] [Full Text] [PDF]


Home page
Plant Physiol.Home page
I. Hwang, H.-C. Chen, and J. Sheen
Two-Component Signal Transduction Pathways in Arabidopsis
Plant Physiology, June 1, 2002; 129(2): 500 - 515.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
S. Makino, A. Matsushika, M. Kojima, T. Yamashino, and T. Mizuno
The APRR1/TOC1 Quintet Implicated in Circadian Rhythms of Arabidopsis thaliana: I. Characterization with APRR1-Overexpressing Plants
Plant Cell Physiol., January 1, 2002; 43(1): 58 - 69.
[Abstract] [Full Text] [PDF]


Home page
Plant Cell PhysiolHome page
A. Matsushika, S. Makino, M. Kojima, T. Yamashino, and T. Mizuno
The APRR1/TOC1 Quintet Implicated in Circadian Rhythms of Arabidopsis thaliana: II. Characterization with CCA1-Overexpressing Plants
Plant Cell Physiol., January 1, 2002; 43(1): 118 - 122.
[Abstract] [Full Text] [PDF]


Home page
ScienceHome page
D. Alabadi, T